STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNMLP00000026354Chondroitin polymerizing factor a. (739 aa)    
Predicted Functional Partners:
ENSNMLP00000010675
Chondroitin sulfate synthase 1.
    
0.906
ENSNMLP00000020190
Chondroitin sulfate synthase 3.
    
0.906
ENSNMLP00000001234
Chondroitin sulfate N-acetylgalactosaminyltransferase 1a.
    
0.892
ENSNMLP00000004247
Chondroitin sulfate N-acetylgalactosaminyltransferase 2.
    
0.892
ENSNMLP00000038431
Chondroitin sulfate N-acetylgalactosaminyltransferase 1b.
    
0.892
ENSNMLP00000032240
Chondroitin polymerizing factor 2.
  
  
 
0.839
ENSNMLP00000011810
annotation not available
   
    0.689
ENSNMLP00000031746
Decorin.
     
 0.542
ENSNMLP00000035455
Chondroitin sulfate proteoglycan 4.
     
 0.531
ENSNMLP00000043713
Si:dkey-193c22.2.
     
 0.531
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
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