STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNMLP00000026536tRNA methyltransferase 61A. (296 aa)    
Predicted Functional Partners:
ENSNMLP00000025877
tRNA methyltransferase 6.
   
 0.999
ENSNMLP00000004635
Methyltransferase like 1.
  
 0.989
ENSNMLP00000020117
WD repeat domain 4.
   
 
 0.987
ENSNMLP00000014519
BUD23 rRNA methyltransferase and ribosome maturation factor.
  
 0.975
ENSNMLP00000005429
PWP2 small subunit processome component.
   
    0.958
ENSNMLP00000044045
tRNA methyltransferase 61B.
  
  
 0.947
ENSNMLP00000024690
tRNA methyltransferase 10C, mitochondrial RNase P subunit.
   
 0.946
ENSNMLP00000031912
tRNA methyltransferase subunit 11-2.
   
 
 0.939
ENSNMLP00000011142
RNA terminal phosphate cyclase-like 1.
   
    0.928
ENSNMLP00000000721
TSR1 ribosome maturation factor.
   
    0.918
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.