STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNMLP00000026800Dorsal root ganglia homeobox. (268 aa)    
Predicted Functional Partners:
ENSNMLP00000011526
LIM domain binding 1a.
    
 0.531
ENSNMLP00000017180
LIM-domain binding 1b.
    
 0.531
ENSNMLP00000041025
LIM domain binding 2a.
    
 0.531
ENSNMLP00000024417
Serum response factor b.
    
 0.509
ENSNMLP00000024418
annotation not available
    
 0.509
LHX3
LIM homeobox 3.
    
 0.482
ENSNMLP00000014502
LIM homeobox 4.
    
0.482
ENSNMLP00000012380
annotation not available
    
  0.471
ENSNMLP00000012382
annotation not available
    
  0.471
ENSNMLP00000004929
Trichorhinophalangeal syndrome I.
    
 0.465
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
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