STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNMLP00000027046Metastasis associated 1 family, member 3. (675 aa)    
Predicted Functional Partners:
ENSNMLP00000037281
Retinoblastoma binding protein 4.
   
 0.951
RBBP7
RB binding protein 7, chromatin remodeling factor.
   
 0.951
ENSNMLP00000025903
annotation not available
   
 0.943
ENSNMLP00000006663
annotation not available
   
 0.928
ENSNMLP00000006683
Chromodomain helicase DNA binding protein 5.
   
 0.928
ENSNMLP00000015473
annotation not available
    
 0.901
ENSNMLP00000012459
methyl-CpG binding domain protein 3a.
   
 0.888
ENSNMLP00000018815
annotation not available
   
 0.888
ENSNMLP00000039818
annotation not available
   
 0.888
ENSNMLP00000006656
annotation not available
   
 0.886
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.