STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNMLP00000027292Secretogranin II (chromogranin C), b. (541 aa)    
Predicted Functional Partners:
ENSNMLP00000030613
Relaxin 3a.
  
   
 0.588
ENSNMLP00000035761
annotation not available
   
  
 0.515
ENSNMLP00000022847
Secretogranin III.
   
  
 0.511
ENSNMLP00000026316
Relaxin 3b.
      
 0.506
ENSNMLP00000038462
Oxytocin.
   
  
 0.504
ENSNMLP00000012613
Tachykinin precursor 3a.
      
 0.481
ENSNMLP00000035883
Secretogranin V.
   
  
 0.457
ENSNMLP00000011937
Carboxypeptidase E.
   
  
 0.443
ENSNMLP00000006681
annotation not available
  
    0.437
ENSNMLP00000036153
Interferon regulatory factor 3.
  
  
  0.434
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.