STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNMLP00000027463CDC42 effector protein (Rho GTPase binding) 3. (229 aa)    
Predicted Functional Partners:
ENSNMLP00000001905
Ras homolog family member H.
    
 0.776
ENSNMLP00000039857
Ras homolog family member Q.
    
 0.776
ENSNMLP00000028100
CDC42 effector protein (Rho GTPase binding) 4a.
     
 0.759
ENSNMLP00000038423
annotation not available
   
 
  0.594
CDC42EP4
CDC42 effector protein 4.
     
 0.583
ENSNMLP00000013916
S-phase kinase-associated protein 1.
      
 0.568
CDC42
Cell division cycle 42.
    
 0.513
ENSNMLP00000042889
annotation not available
    
 0.513
ENSNMLP00000008370
IQ motif containing GTPase activating protein 3.
     
 0.507
ENSNMLP00000026488
IQ motif containing GTPase activating protein 1.
     
 0.507
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
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