STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNMLP00000027706WD repeat domain 32. (463 aa)    
Predicted Functional Partners:
ENSNMLP00000024830
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
 0.997
ENSNMLP00000022528
Damage-specific DNA binding protein 1.
    
 0.938
ENSNMLP00000043117
Excision repair cross-complementation group 8.
    
 0.917
ENSNMLP00000008209
Ddb1 and cul4 associated factor 5.
     
 0.909
ENSNMLP00000023525
Cullin 4A.
    
 0.905
ENSNMLP00000030979
Cell division cycle 73, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae).
    
 0.903
ENSNMLP00000013790
Ring-box 1, E3 ubiquitin protein ligase.
    
 0.897
ENSNMLP00000043689
WD repeat domain 21.
     
 0.897
ENSNMLP00000003020
PAF1 homolog, Paf1/RNA polymerase II complex component.
   
 0.887
ENSNMLP00000019328
Ddb1 and cul4 associated factor 11.
    
 0.882
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
Server load: low (24%) [HD]