STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNMLP00000027840Gap junction protein, alpha 5a. (372 aa)    
Predicted Functional Partners:
ENSNMLP00000005313
Connexin 43.
  
 
0.912
ENSNMLP00000030633
Connexin 47.1.
  
  
0.873
ENSNMLP00000023868
annotation not available
    
0.858
ENSNMLP00000034991
annotation not available
  
  
0.852
ENSNMLP00000005553
Connexin 43.4.
  
  
0.849
GJC1
Gap junction protein gamma 1.
     
0.843
ENSNMLP00000038198
Connexin 34.5.
  
 
0.831
ENSNMLP00000038203
Connexin 28.9.
  
 
0.830
ENSNMLP00000013929
Connexin 27.5.
  
 
0.828
ENSNMLP00000038201
Connexin 32.3.
    
0.827
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
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