STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNMLP00000028284La ribonucleoprotein 4Aa. (816 aa)    
Predicted Functional Partners:
ENSNMLP00000008455
DEAH (Asp-Glu-Ala-His) box polypeptide 36.
   
 0.826
ENSNMLP00000043943
Ribosomal protein S3A.
   
  0.811
ENSNMLP00000008771
MCTS1 re-initiation and release factor.
     
 0.806
ENSNMLP00000015281
DEAH (Asp-Glu-Ala-His) box helicase 9.
    
 0.798
ENSNMLP00000041073
Si:dkey-159f12.2.
    
  0.785
ENSNMLP00000023498
annotation not available
   
 
 0.782
ENSNMLP00000044910
Ribosomal protein S5.
     
 0.782
ENSNMLP00000012554
Ribosomal protein S9.
     
 0.780
ENSNMLP00000004725
Ribosomal protein S16.
    
  0.775
ENSNMLP00000032458
Ribosomal protein S3.
     
 0.775
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.