STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNMLP00000028361Ribulose-5-phosphate-3-epimerase. (246 aa)    
Predicted Functional Partners:
ENSNMLP00000015633
Transaldolase 1.
  
 0.972
ENSNMLP00000000974
Ribose 5-phosphate isomerase A (ribose 5-phosphate epimerase).
  
 0.968
ENSNMLP00000035222
Transketolase a.
  
 0.960
ENSNMLP00000017859
Transketolase b.
  
 0.956
ENSNMLP00000036968
annotation not available
  
 0.956
ENSNMLP00000024794
Xylulokinase homolog (H. influenzae).
   
 0.949
ENSNMLP00000014024
Hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase).
  
 0.947
ENSNMLP00000036996
Glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase.
  
 
 0.943
ENSNMLP00000041185
Triosephosphate isomerase 1b.
  
 
 0.942
ENSNMLP00000004797
Glucose-6-phosphate isomerase b.
    
 0.941
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
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