STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNMLP00000028549Ras converting CAAX endopeptidase 1a. (200 aa)    
Predicted Functional Partners:
ENSNMLP00000002560
Zinc metallopeptidase, STE24 homolog.
    
 0.947
ENSNMLP00000002995
Zinc metallopeptidase, STE24 homolog.
    
 0.947
ENSNMLP00000042425
Isoprenylcysteine carboxyl methyltransferase.
   
 0.936
ENSNMLP00000041273
Farnesyltransferase, CAAX box, beta.
    
 0.927
ENSNMLP00000035662
Churchill domain containing 1.
    
 0.920
ENSNMLP00000011808
Farnesyltransferase, CAAX box, alpha.
     
 0.914
ENSNMLP00000020080
OMA1 zinc metallopeptidase.
    
 0.881
ENSNMLP00000016433
Ubiquitin specific peptidase 36.
     
 0.798
ENSNMLP00000028546
annotation not available
 
   
  0.765
ENSNMLP00000019387
annotation not available
     
 0.715
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.