STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNMLP00000028612Transmembrane protein 134. (214 aa)    
Predicted Functional Partners:
ENSNMLP00000044688
Ring finger protein 170.
      
 0.472
ENSNMLP00000028049
Torsin family 2, member A.
      
 0.468
ENSNMLP00000039511
annotation not available
    
   0.468
ENSNMLP00000028051
peptidyl-tRNA hydrolase 1 homolog.
      
 0.454
ENSNMLP00000022779
annotation not available
      
 0.422
ENSNMLP00000010033
annotation not available
      
 0.418
ENSNMLP00000022631
Family with sequence similarity 185 member A.
      
 0.405
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.