STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNMLP00000028663Rho/rac guanine nucleotide exchange factor (GEF) 18b. (1042 aa)    
Predicted Functional Partners:
ENSNMLP00000017799
Ras homolog gene family, member Aa.
   
 0.931
ENSNMLP00000007966
annotation not available
   
 0.879
ENSNMLP00000017134
annotation not available
   
 0.879
RHOB
Ras homolog family member B.
   
 0.879
ENSNMLP00000023150
annotation not available
   
 0.879
ENSNMLP00000031957
annotation not available
   
 0.854
ENSNMLP00000040361
annotation not available
   
 0.854
ENSNMLP00000004643
Cingulin b.
     
 0.852
ENSNMLP00000025931
Serine/threonine kinase 11.
     
 0.842
ENSNMLP00000042222
Rho/rac guanine nucleotide exchange factor (GEF) 18a.
  
  
 
0.841
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.