STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MSX1Msh homeobox 1. (246 aa)    
Predicted Functional Partners:
ENSNMLP00000018960
Muscle segment homeobox 2b.
  
0.936
ENSNMLP00000038549
Paired box 9.
    
 
 0.607
ENSNMLP00000029332
Upstream binding transcription factor, like.
    
 
 0.559
ENSNMLP00000017686
Paired box 1a.
    
 
 0.545
ENSNMLP00000042496
Transthyretin (prealbumin, amyloidosis type I).
   
 
 0.538
ENSNMLP00000005594
annotation not available
     
 0.527
ENSNMLP00000006598
Necdin-like 2.
    
 
 0.527
ENSNMLP00000007082
Urate (5-hydroxyiso-) hydrolase b.
     
 0.527
ENSNMLP00000010595
Cysteine-serine-rich nuclear protein 1b.
      
 0.519
ENSNMLP00000022914
Lymphoid enhancer-binding factor 1.
   
  
 0.518
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.