STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNMLP00000028797RNA pseudouridine synthase domain containing 2. (558 aa)    
Predicted Functional Partners:
ENSNMLP00000012979
Si:zfos-1192g2.3.
  
 
 0.929
ENSNMLP00000043655
GTP binding protein 3, mitochondrial.
  
 
 0.926
ENSNMLP00000021100
Mitochondrial rRNA methyltransferase 3a.
  
 
 0.917
ENSNMLP00000026915
annotation not available
  
   0.895
ENSNMLP00000019745
Mitochondrial ribosomal protein L17.
   
   0.894
ENSNMLP00000026548
NADH:ubiquinone oxidoreductase subunit AB1b.
  
 
 0.894
ENSNMLP00000000565
Ribosomal protein L23.
   
 
 0.893
ENSNMLP00000010706
Mitochondrial ribosomal protein L3.
   
 
 0.883
ENSNMLP00000026946
annotation not available
   
 
 0.879
ENSNMLP00000032742
Mitochondrial ribosomal protein L13.
  
   0.877
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
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