STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNMLP00000028890tRNA methyltransferase 44 homolog. (629 aa)    
Predicted Functional Partners:
ENSNMLP00000025877
tRNA methyltransferase 6.
   
  
 0.708
ENSNMLP00000044703
Pseudouridine synthase 1.
   
  
 0.692
ENSNMLP00000004635
Methyltransferase like 1.
   
  
 0.676
ENSNMLP00000026536
tRNA methyltransferase 61A.
   
  
 0.632
ENSNMLP00000010536
FtsJ RNA 2'-O-methyltransferase 1.
   
  
 0.611
ENSNMLP00000008964
Pseudouridylate synthase 3.
   
  
 0.606
ENSNMLP00000037730
tRNA methyltransferase 13 homolog.
   
  
 0.603
ENSNMLP00000021678
TruB pseudouridine (psi) synthase family member 1.
   
  
 0.586
ENSNMLP00000020117
WD repeat domain 4.
   
  
 0.561
ENSNMLP00000001286
NOP2/Sun RNA methyltransferase 2.
   
  
 0.533
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.