STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SATB1SATB homeobox 1. (525 aa)    
Predicted Functional Partners:
ENSNMLP00000009016
annotation not available
 
      0.899
ENSNMLP00000029398
annotation not available
 
      0.899
ENSNMLP00000044729
annotation not available
 
      0.899
UBL5
Ubiquitin like 5.
    
 0.728
ENSNMLP00000022926
Caspase 6, apoptosis-related cysteine peptidase a.
    
  0.675
ENSNMLP00000002648
annotation not available
    
  0.655
ENSNMLP00000035600
Ubiquitin-conjugating enzyme E2Ia.
    
  0.655
ENSNMLP00000023439
Small ubiquitin like modifier 1.
    
 0.626
ENSNMLP00000022695
Potassium channel tetramerization domain containing 2.
    
  0.622
ENSNMLP00000000002
annotation not available
    
 0.576
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.