STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNMLP00000029399Tetratricopeptide repeat domain 14. (628 aa)    
Predicted Functional Partners:
ENSNMLP00000044968
PNN-interacting serine/arginine-rich protein.
   
   0.848
ENSNMLP00000024830
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
 0.798
ENSNMLP00000013752
RNA-binding region (RNP1, RRM) containing 3.
   
   0.753
ENSNMLP00000020260
Splicing factor 3b, subunit 1.
   
  
 0.681
ENSNMLP00000043214
Intraflagellar transport 81 homolog.
    
 0.640
ENSNMLP00000021321
Ess-2 splicing factor homolog.
   
 
 0.625
ENSNMLP00000023135
annotation not available
    
 
 0.550
ENSNMLP00000022162
annotation not available
    
 0.547
ENSNMLP00000038996
annotation not available
    
 0.547
ENSNMLP00000038998
Myosin IIIB.
    
 0.547
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.