STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNMLP00000029497annotation not available (533 aa)    
Predicted Functional Partners:
ENSNMLP00000019856
TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor.
    
  0.837
ENSNMLP00000005217
TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor.
   
 
  0.803
ENSNMLP00000032296
Zinc ribbon domain containing 1.
    
 0.776
ENSNMLP00000038765
annotation not available
    
 0.763
ENSNMLP00000005425
TWIST neighbor.
    
 0.754
ENSNMLP00000015078
RNA polymerase I and III subunit C.
    
  0.751
ENSNMLP00000029332
Upstream binding transcription factor, like.
    
 0.714
ENSNMLP00000033523
Polymerase (RNA) II (DNA directed) polypeptide C.
    
  0.710
ENSNMLP00000043681
annotation not available
     
 0.697
ENSNMLP00000002904
annotation not available
    
 0.693
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
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