STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNMLP00000030040Vimentin-related 1. (217 aa)    
Predicted Functional Partners:
ENSNMLP00000037914
Barrier to autointegration factor 1.
   
 0.814
ENSNMLP00000017874
LEM domain containing 3.
    
 0.783
ENSNMLP00000007694
annotation not available
    
 0.771
ENSNMLP00000021379
Glial fibrillary acidic protein.
    
0.735
ENSNMLP00000000421
annotation not available
    
 
 0.731
ENSNMLP00000044178
annotation not available
    
   0.694
ENSNMLP00000021361
Caspase 10, apoptosis-related cysteine peptidase.
    
 0.587
ENSNMLP00000035221
annotation not available
    
 0.587
ENSNMLP00000041191
Titin-cap (telethonin).
   
 
 0.577
ENSNMLP00000016847
Parvalbumin 6.
    
 0.539
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.