STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNMLP00000030041THUMP domain containing 3. (480 aa)    
Predicted Functional Partners:
ENSNMLP00000042735
annotation not available
   
 0.940
ENSNMLP00000009994
WASP like actin nucleation promoting factor a.
   
 0.738
ENSNMLP00000034685
annotation not available
   
 0.738
ENSNMLP00000044298
annotation not available
   
 0.738
ENSNMLP00000013727
annotation not available
    
   0.696
ENSNMLP00000031912
tRNA methyltransferase subunit 11-2.
    
 
 0.685
ENSNMLP00000008682
annotation not available
    
 0.678
ENSNMLP00000031759
Growth arrest-specific 7a.
    
 0.678
ENSNMLP00000004152
NCK interacting protein with SH3 domain.
    
 
 0.629
ENSNMLP00000038786
H2A.Z variant histone 2a.
 
      0.601
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.