STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNMLP00000030136Thyroid hormone receptor alpha b. (390 aa)    
Predicted Functional Partners:
TADA1
Transcriptional adaptor 1.
    
 0.935
ENSNMLP00000022737
Mediator complex subunit 1.
    
 0.932
ENSNMLP00000012989
annotation not available
    
0.871
ENSNMLP00000015532
annotation not available
    
0.871
RXRB
Retinoid X receptor beta.
    
0.871
ENSNMLP00000029633
Nuclear receptor coactivator 3.
    
 0.868
ENSNMLP00000036683
Nuclear receptor coactivator 1.
    
 0.868
ENSNMLP00000000780
Mediator complex subunit 24.
    
  0.855
ENSNMLP00000032712
Mediator complex subunit 17.
    
  0.848
ENSNMLP00000007854
Mediator complex subunit 14.
    
  0.846
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.