ENSNMLP00000030244 protein (Neogobius melanostomus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ENSNMLP00000030244

annotation not available (316 aa)

Predicted Functional Partners:

ENSNMLP00000017533

0.883

ENSNMLP00000001597

0.881

ENSNMLP00000013160

0.881

ENSNMLP00000001085

0.864

HNRNPLL

0.838

HNRNPL

0.838

ENSNMLP00000021277

0.834

ENSNMLP00000021513

0.834

ENSNMLP00000019856

0.815

ENSNMLP00000024665

0.791

Your Current Organism:

Neogobius melanostomus

NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSNMLP00000001085	ENSNMLP00000017533	ENSNMLP00000001085	ENSNMLP00000017533	annotation not available	Heterogeneous nuclear ribonucleoprotein K.	0.790
ENSNMLP00000001085	ENSNMLP00000021277	ENSNMLP00000001085	ENSNMLP00000021277	annotation not available	Heterogeneous nuclear ribonucleoprotein C.	0.776
ENSNMLP00000001085	ENSNMLP00000030244	ENSNMLP00000001085	ENSNMLP00000030244	annotation not available	annotation not available	0.864
ENSNMLP00000001085	HNRNPL	ENSNMLP00000001085	ENSNMLP00000019495	annotation not available	Heterogeneous nuclear ribonucleoprotein L.	0.739
ENSNMLP00000001085	HNRNPLL	ENSNMLP00000001085	ENSNMLP00000013874	annotation not available	Heterogeneous nuclear ribonucleoprotein L like.	0.739
ENSNMLP00000001597	ENSNMLP00000017533	ENSNMLP00000001597	ENSNMLP00000017533	TAR DNA binding protein, like.	Heterogeneous nuclear ribonucleoprotein K.	0.902
ENSNMLP00000001597	ENSNMLP00000021277	ENSNMLP00000001597	ENSNMLP00000021277	TAR DNA binding protein, like.	Heterogeneous nuclear ribonucleoprotein C.	0.848
ENSNMLP00000001597	ENSNMLP00000024665	ENSNMLP00000001597	ENSNMLP00000024665	TAR DNA binding protein, like.	Interleukin enhancer binding factor 3b.	0.709
ENSNMLP00000001597	ENSNMLP00000030244	ENSNMLP00000001597	ENSNMLP00000030244	TAR DNA binding protein, like.	annotation not available	0.881
ENSNMLP00000001597	HNRNPL	ENSNMLP00000001597	ENSNMLP00000019495	TAR DNA binding protein, like.	Heterogeneous nuclear ribonucleoprotein L.	0.565
ENSNMLP00000001597	HNRNPLL	ENSNMLP00000001597	ENSNMLP00000013874	TAR DNA binding protein, like.	Heterogeneous nuclear ribonucleoprotein L like.	0.565
ENSNMLP00000013160	ENSNMLP00000017533	ENSNMLP00000013160	ENSNMLP00000017533	TAR DNA binding protein.	Heterogeneous nuclear ribonucleoprotein K.	0.902
ENSNMLP00000013160	ENSNMLP00000021277	ENSNMLP00000013160	ENSNMLP00000021277	TAR DNA binding protein.	Heterogeneous nuclear ribonucleoprotein C.	0.848
ENSNMLP00000013160	ENSNMLP00000024665	ENSNMLP00000013160	ENSNMLP00000024665	TAR DNA binding protein.	Interleukin enhancer binding factor 3b.	0.709
ENSNMLP00000013160	ENSNMLP00000030244	ENSNMLP00000013160	ENSNMLP00000030244	TAR DNA binding protein.	annotation not available	0.881
ENSNMLP00000013160	HNRNPL	ENSNMLP00000013160	ENSNMLP00000019495	TAR DNA binding protein.	Heterogeneous nuclear ribonucleoprotein L.	0.565
ENSNMLP00000013160	HNRNPLL	ENSNMLP00000013160	ENSNMLP00000013874	TAR DNA binding protein.	Heterogeneous nuclear ribonucleoprotein L like.	0.565
ENSNMLP00000017533	ENSNMLP00000001085	ENSNMLP00000017533	ENSNMLP00000001085	Heterogeneous nuclear ribonucleoprotein K.	annotation not available	0.790
ENSNMLP00000017533	ENSNMLP00000001597	ENSNMLP00000017533	ENSNMLP00000001597	Heterogeneous nuclear ribonucleoprotein K.	TAR DNA binding protein, like.	0.902
ENSNMLP00000017533	ENSNMLP00000013160	ENSNMLP00000017533	ENSNMLP00000013160	Heterogeneous nuclear ribonucleoprotein K.	TAR DNA binding protein.	0.902