STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNMLP00000030311Serine palmitoyltransferase, long chain base subunit 2b. (565 aa)    
Predicted Functional Partners:
ENSNMLP00000008334
Serine palmitoyltransferase, small subunit A.
    
 0.938
ENSNMLP00000003383
Sorbitol dehydrogenase.
  
 
 0.890
ENSNMLP00000037265
3-ketodihydrosphingosine reductase.
     
 0.859
ENSNMLP00000018335
ORMDL sphingolipid biosynthesis regulator 1.
    
 0.847
ENSNMLP00000027713
ORMDL sphingolipid biosynthesis regulator 3.
    
 0.847
ENSNMLP00000033110
annotation not available
    
 0.847
ENSNMLP00000022482
Alanine--glyoxylate and serine--pyruvate aminotransferase a.
    
 0.839
ENSNMLP00000014589
Serine palmitoyltransferase, small subunit B.
    
 0.837
ENSNMLP00000039853
annotation not available
   
 0.828
SDS
Serine dehydratase.
   
 0.828
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.