STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNMLP00000030531Kin17 DNA and RNA binding protein. (392 aa)    
Predicted Functional Partners:
ENSNMLP00000000393
Methyltransferase like 22.
    
 0.959
ENSNMLP00000020260
Splicing factor 3b, subunit 1.
    
   0.891
ENSNMLP00000021060
Splicing factor 3a, subunit 3.
    
 
 0.871
ENSNMLP00000025913
Splicing factor 3a, subunit 2.
    
 
 0.871
ENSNMLP00000000378
BUD13 homolog.
   
   0.849
ENSNMLP00000040451
Elongation factor Tu GTP binding domain containing 2.
    
   0.836
ENSNMLP00000043892
Small nuclear ribonucleoprotein 200 (U5).
    
   0.836
ENSNMLP00000016662
annotation not available
    
 
 0.814
ENSNMLP00000028613
annotation not available
    
 
 0.814
ENSNMLP00000012620
Cell division cycle 40 homolog (S. cerevisiae).
   
   0.809
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.