ENSNMLP00000030568 protein (Neogobius melanostomus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ENSNMLP00000030568

Guanylate kinase 1a. (207 aa)

Predicted Functional Partners:

ENSNMLP00000012382

0.925

ENSNMLP00000012380

0.912

ENSNMLP00000015149

0.907

ENSNMLP00000006368

0.905

ENSNMLP00000022669

0.871

ENSNMLP00000040704

0.869

ENSNMLP00000009641

0.866

PDE6G

0.866

ENSNMLP00000018927

0.865

ENSNMLP00000021951

0.865

Your Current Organism:

Neogobius melanostomus

NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSNMLP00000006368	ENSNMLP00000012380	ENSNMLP00000006368	ENSNMLP00000012380	Guanine monophosphate synthase.	annotation not available	0.747
ENSNMLP00000006368	ENSNMLP00000012382	ENSNMLP00000006368	ENSNMLP00000012382	Guanine monophosphate synthase.	annotation not available	0.789
ENSNMLP00000006368	ENSNMLP00000015149	ENSNMLP00000006368	ENSNMLP00000015149	Guanine monophosphate synthase.	Adenine phosphoribosyltransferase.	0.986
ENSNMLP00000006368	ENSNMLP00000021951	ENSNMLP00000006368	ENSNMLP00000021951	Guanine monophosphate synthase.	HD domain containing 3.	0.671
ENSNMLP00000006368	ENSNMLP00000030568	ENSNMLP00000006368	ENSNMLP00000030568	Guanine monophosphate synthase.	Guanylate kinase 1a.	0.905
ENSNMLP00000009641	ENSNMLP00000022669	ENSNMLP00000009641	ENSNMLP00000022669	annotation not available	Guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 2.	0.626
ENSNMLP00000009641	ENSNMLP00000030568	ENSNMLP00000009641	ENSNMLP00000030568	annotation not available	Guanylate kinase 1a.	0.866
ENSNMLP00000009641	PDE6G	ENSNMLP00000009641	ENSNMLP00000014730	annotation not available	Phosphodiesterase 6G.	0.838
ENSNMLP00000012380	ENSNMLP00000006368	ENSNMLP00000012380	ENSNMLP00000006368	annotation not available	Guanine monophosphate synthase.	0.747
ENSNMLP00000012380	ENSNMLP00000012382	ENSNMLP00000012380	ENSNMLP00000012382	annotation not available	annotation not available	0.999
ENSNMLP00000012380	ENSNMLP00000015149	ENSNMLP00000012380	ENSNMLP00000015149	annotation not available	Adenine phosphoribosyltransferase.	0.915
ENSNMLP00000012380	ENSNMLP00000018927	ENSNMLP00000012380	ENSNMLP00000018927	annotation not available	NME/NM23 nucleoside diphosphate kinase 3.	0.897
ENSNMLP00000012380	ENSNMLP00000021951	ENSNMLP00000012380	ENSNMLP00000021951	annotation not available	HD domain containing 3.	0.863
ENSNMLP00000012380	ENSNMLP00000030568	ENSNMLP00000012380	ENSNMLP00000030568	annotation not available	Guanylate kinase 1a.	0.912
ENSNMLP00000012380	ENSNMLP00000040704	ENSNMLP00000012380	ENSNMLP00000040704	annotation not available	Ectonucleoside triphosphate diphosphohydrolase 3.	0.845
ENSNMLP00000012382	ENSNMLP00000006368	ENSNMLP00000012382	ENSNMLP00000006368	annotation not available	Guanine monophosphate synthase.	0.789
ENSNMLP00000012382	ENSNMLP00000012380	ENSNMLP00000012382	ENSNMLP00000012380	annotation not available	annotation not available	0.999
ENSNMLP00000012382	ENSNMLP00000015149	ENSNMLP00000012382	ENSNMLP00000015149	annotation not available	Adenine phosphoribosyltransferase.	0.941
ENSNMLP00000012382	ENSNMLP00000018927	ENSNMLP00000012382	ENSNMLP00000018927	annotation not available	NME/NM23 nucleoside diphosphate kinase 3.	0.925
ENSNMLP00000012382	ENSNMLP00000021951	ENSNMLP00000012382	ENSNMLP00000021951	annotation not available	HD domain containing 3.	0.906