STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNMLP00000030700Casein kinase 1, delta b. (393 aa)    
Predicted Functional Partners:
ENSNMLP00000023209
LTV1 ribosome biogenesis factor.
    
 0.970
ENSNMLP00000006239
Casein kinase 1, alpha 1.
  
 
0.928
ENSNMLP00000017762
Bystin-like.
    
 0.925
ENSNMLP00000000721
TSR1 ribosome maturation factor.
    
 0.912
ENSNMLP00000023654
NIN1 (RPN12) binding protein 1 homolog.
    
 0.892
ENSNMLP00000004547
Period circadian clock 3.
    
 0.870
ENSNMLP00000009526
annotation not available
    
 0.870
ENSNMLP00000020764
Period circadian clock 2.
    
 0.870
ENSNMLP00000035328
Period circadian clock 1b.
    
 0.870
PER2
Period circadian regulator 2.
    
 0.870
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.