STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HIGD1AHIG1 hypoxia inducible domain family member 1A. (89 aa)    
Predicted Functional Partners:
ENSNMLP00000024200
Peptidase (mitochondrial processing) beta.
   
 
 0.828
ENSNMLP00000013194
annotation not available
   
 
 0.797
ENSNMLP00000025749
annotation not available
   
 
 0.797
ENSNMLP00000037435
Cytochrome c oxidase subunit 6A1.
   
 
 0.797
ENSNMLP00000001569
Cytochrome c oxidase subunit 5B2.
   
 
 0.759
COX5B
Cytochrome c oxidase subunit 5B.
   
 
 0.759
ENSNMLP00000038207
Chromosome 1 open reading frame 198.
   
 
 0.759
ENSNMLP00000001175
annotation not available
    
 
 0.755
ENSNMLP00000000418
Cytochrome c oxidase subunit 6B1.
   
 
 0.713
ENSNMLP00000005567
annotation not available
   
 
 0.713
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.