STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IPPIntracisternal A particle-promoted polypeptide. (621 aa)    
Predicted Functional Partners:
CUL3
Cullin 3.
    
 0.889
ENSNMLP00000030280
Cullin 3b.
    
 0.889
ENSNMLP00000035805
SEC13 homolog, nuclear pore and COPII coat complex component.
    
 0.854
ENSNMLP00000013790
Ring-box 1, E3 ubiquitin protein ligase.
    
 0.830
ENSNMLP00000005994
Kelch-like family member 7.
  
 
 
0.819
ENSNMLP00000005339
Kelch-like family member 22.
  
 
 
0.813
GAN
Gigaxonin.
  
 
 
0.813
ENSNMLP00000039070
Kelch repeat and BTB (POZ) domain containing 8.
    
0.800
ENSNMLP00000002957
Kelch repeat and BTB (POZ) domain containing 7.
    
 
0.793
ENSNMLP00000035283
Kelch-like family, member 42.
  
 
 
0.786
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.