STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNMLP00000031387Integrin, beta 5. (805 aa)    
Predicted Functional Partners:
ENSNMLP00000014964
Fibronectin 1b.
    
 0.958
ENSNMLP00000044893
Filamin C, gamma a (actin binding protein 280).
    
 0.958
ENSNMLP00000011453
Integrin, alpha 8.
   
 0.942
ENSNMLP00000015989
annotation not available
   
 0.938
ENSNMLP00000041498
Integrin, alpha 9.
   
 0.934
ENSNMLP00000042408
annotation not available
    
 0.932
ENSNMLP00000031252
Integrin, alpha 6a.
   
 0.930
ENSNMLP00000013986
Integrin, alpha 3b.
   
 0.926
ENSNMLP00000004911
Integrin, alpha V.
   
 0.920
ENSNMLP00000020071
Integrin, alpha 5 (fibronectin receptor, alpha polypeptide).
   
 0.920
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.