STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNMLP00000031539F-box protein 41. (768 aa)    
Predicted Functional Partners:
ENSNMLP00000013916
S-phase kinase-associated protein 1.
    
 0.910
ENSNMLP00000015878
Cullin 1a.
    
 0.812
CUL3
Cullin 3.
    
 0.700
ENSNMLP00000030280
Cullin 3b.
    
 0.700
ENSNMLP00000033246
annotation not available
    
  0.659
ENSNMLP00000033644
NEDD8 ubiquitin like modifier, like.
    
  0.659
ENSNMLP00000037686
COMM domain containing 2.
     
 0.648
ENSNMLP00000023281
Rab geranylgeranyltransferase subunit beta.
    
 
 0.635
RABGGTB
Rab geranylgeranyltransferase subunit beta.
    
 
 0.635
ENSNMLP00000013790
Ring-box 1, E3 ubiquitin protein ligase.
     
 0.632
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
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