ENSNMLP00000031769 protein (Neogobius melanostomus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ENSNMLP00000031769

Nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha a. (310 aa)

Predicted Functional Partners:

ENSNMLP00000013916

0.987

ENSNMLP00000019178

0.987

ENSNMLP00000008623

0.986

ENSNMLP00000015878

0.976

ENSNMLP00000029725

0.963

ENSNMLP00000001079

0.959

ENSNMLP00000005318

0.955

ENSNMLP00000030089

0.955

CHUK

0.936

ENSNMLP00000007557

0.926

Your Current Organism:

Neogobius melanostomus

NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CHUK	ENSNMLP00000001079	ENSNMLP00000022587	ENSNMLP00000001079	Component of inhibitor of nuclear factor kappa B kinase complex.	Ribosomal protein S27a.	0.733
CHUK	ENSNMLP00000005318	ENSNMLP00000022587	ENSNMLP00000005318	Component of inhibitor of nuclear factor kappa B kinase complex.	annotation not available	0.860
CHUK	ENSNMLP00000007557	ENSNMLP00000022587	ENSNMLP00000007557	Component of inhibitor of nuclear factor kappa B kinase complex.	annotation not available	0.693
CHUK	ENSNMLP00000008623	ENSNMLP00000022587	ENSNMLP00000008623	Component of inhibitor of nuclear factor kappa B kinase complex.	Inhibitor of nuclear factor kappa B kinase subunit beta.	0.851
CHUK	ENSNMLP00000013916	ENSNMLP00000022587	ENSNMLP00000013916	Component of inhibitor of nuclear factor kappa B kinase complex.	S-phase kinase-associated protein 1.	0.706
CHUK	ENSNMLP00000015878	ENSNMLP00000022587	ENSNMLP00000015878	Component of inhibitor of nuclear factor kappa B kinase complex.	Cullin 1a.	0.719
CHUK	ENSNMLP00000019178	ENSNMLP00000022587	ENSNMLP00000019178	Component of inhibitor of nuclear factor kappa B kinase complex.	Nuclear factor of kappa light polypeptide gene enhancer in B-cells 2 (p49/p100).	0.943
CHUK	ENSNMLP00000029725	ENSNMLP00000022587	ENSNMLP00000029725	Component of inhibitor of nuclear factor kappa B kinase complex.	F-box and WD repeat domain containing 11a.	0.776
CHUK	ENSNMLP00000030089	ENSNMLP00000022587	ENSNMLP00000030089	Component of inhibitor of nuclear factor kappa B kinase complex.	V-rel avian reticuloendotheliosis viral oncogene homolog A.	0.860
CHUK	ENSNMLP00000031769	ENSNMLP00000022587	ENSNMLP00000031769	Component of inhibitor of nuclear factor kappa B kinase complex.	Nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha a.	0.936
ENSNMLP00000001079	CHUK	ENSNMLP00000001079	ENSNMLP00000022587	Ribosomal protein S27a.	Component of inhibitor of nuclear factor kappa B kinase complex.	0.733
ENSNMLP00000001079	ENSNMLP00000005318	ENSNMLP00000001079	ENSNMLP00000005318	Ribosomal protein S27a.	annotation not available	0.745
ENSNMLP00000001079	ENSNMLP00000007557	ENSNMLP00000001079	ENSNMLP00000007557	Ribosomal protein S27a.	annotation not available	0.999
ENSNMLP00000001079	ENSNMLP00000008623	ENSNMLP00000001079	ENSNMLP00000008623	Ribosomal protein S27a.	Inhibitor of nuclear factor kappa B kinase subunit beta.	0.783
ENSNMLP00000001079	ENSNMLP00000013916	ENSNMLP00000001079	ENSNMLP00000013916	Ribosomal protein S27a.	S-phase kinase-associated protein 1.	0.919
ENSNMLP00000001079	ENSNMLP00000015878	ENSNMLP00000001079	ENSNMLP00000015878	Ribosomal protein S27a.	Cullin 1a.	0.960
ENSNMLP00000001079	ENSNMLP00000019178	ENSNMLP00000001079	ENSNMLP00000019178	Ribosomal protein S27a.	Nuclear factor of kappa light polypeptide gene enhancer in B-cells 2 (p49/p100).	0.749
ENSNMLP00000001079	ENSNMLP00000029725	ENSNMLP00000001079	ENSNMLP00000029725	Ribosomal protein S27a.	F-box and WD repeat domain containing 11a.	0.890
ENSNMLP00000001079	ENSNMLP00000030089	ENSNMLP00000001079	ENSNMLP00000030089	Ribosomal protein S27a.	V-rel avian reticuloendotheliosis viral oncogene homolog A.	0.745
ENSNMLP00000001079	ENSNMLP00000031769	ENSNMLP00000001079	ENSNMLP00000031769	Ribosomal protein S27a.	Nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha a.	0.959