STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNMLP00000031973Tumor necrosis factor receptor superfamily, member 19. (286 aa)    
Predicted Functional Partners:
ENSNMLP00000019009
TNF receptor-associated factor 6.
    
 0.980
ENSNMLP00000019707
annotation not available
     
 0.924
ENSNMLP00000008250
Tnf receptor-associated factor 2a.
    
 0.816
ENSNMLP00000008533
Tnf receptor-associated factor 2b.
    
 0.816
ENSNMLP00000010067
annotation not available
    
 0.816
ENSNMLP00000043347
Un-named sa808.
    
 0.816
ENSNMLP00000007866
PDZ domain containing RING finger 3b.
    
 0.670
ENSNMLP00000009058
PDZ domain containing ring finger 4.
    
 0.670
ENSNMLP00000020496
Ring finger protein 41.
    
 0.670
ENSNMLP00000020744
Tnf receptor-associated factor 4a.
    
 0.670
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.