STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNMLP00000032026Low density lipoprotein receptor a. (908 aa)    
Predicted Functional Partners:
ENSNMLP00000027598
Low density lipoprotein receptor adaptor protein 1b.
    
 0.939
ENSNMLP00000020830
Proprotein convertase subtilisin/kexin type 9.
    
 0.926
ENSNMLP00000020085
DAB adaptor protein 1a.
    
 0.906
ENSNMLP00000000206
Low density lipoprotein receptor adaptor protein 1a.
    
 0.886
ENSNMLP00000034547
annotation not available
    
 0.883
ENSNMLP00000000309
Si:dkey-71h2.2.
    
  0.868
ENSNMLP00000034788
Si:dkey-19b23.8.
    
  0.868
ENSNMLP00000019801
Apolipoprotein Eb.
    
 0.862
ENSNMLP00000000994
Myosin regulatory light chain interacting protein a.
    
 0.859
ENSNMLP00000031452
Dickkopf WNT signaling pathway inhibitor 1a.
    
 0.855
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
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