STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNMLP00000032485annotation not available (149 aa)    
Predicted Functional Partners:
ENSNMLP00000002157
DEAD (Asp-Glu-Ala-Asp) box polypeptide 10.
   
 
 0.913
ENSNMLP00000002373
DEAD (Asp-Glu-Ala-Asp) box polypeptide 51.
   
   0.676
ENSNMLP00000005452
NIP7 nucleolar pre-rRNA processing protein.
    
 
 0.630
ENSNMLP00000002016
annotation not available
    
   0.606
ENSNMLP00000002756
WD repeat domain 89.
    
   0.606
ENSNMLP00000018790
DEAD (Asp-Glu-Ala-Asp) box polypeptide 55.
   
   0.604
ZNHIT6
Zinc finger HIT-type containing 6.
   
  
 0.584
ENSNMLP00000036347
BRCA2 and CDKN1A interacting protein.
   
  
 0.576
ENSNMLP00000010293
DEAD (Asp-Glu-Ala-Asp) box helicase 24.
   
   0.549
ENSNMLP00000019042
ESF1, nucleolar pre-rRNA processing protein, homolog (S. cerevisiae).
   
  
 0.536
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.