STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNMLP00000032507Transient receptor potential cation channel, subfamily A, member 1b. (1088 aa)    
Predicted Functional Partners:
ENSNMLP00000040272
Hypoxia inducible factor 1 subunit alpha inhibitor.
    
   0.891
ENSNMLP00000015685
Protein kinase C, eta, a.
    
 0.845
ENSNMLP00000026968
Protein kinase C, epsilon b.
    
 0.845
ENSNMLP00000034757
Transient receptor potential cation channel, subfamily M, member 2.
     
 0.799
ENSNMLP00000031471
Protein kinase C, theta.
    
 0.740
ENSNMLP00000036045
Protein kinase C, delta a.
    
 0.740
ENSNMLP00000042734
Protein kinase C, delta b.
    
 0.740
ENSNMLP00000019026
Transient receptor potential cation channel, subfamily M, member 5.
     
 0.677
ENSNMLP00000001976
Transient receptor potential cation channel, subfamily V, member 1.
     
 0.641
ENSNMLP00000041714
Transient receptor potential cation channel, subfamily C, member 1.
     
 0.635
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.