STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNMLP00000032523TBP-like 1. (188 aa)    
Predicted Functional Partners:
ENSNMLP00000031135
General transcription factor IIA, 1.
   
 0.990
ENSNMLP00000041443
General transcription factor IIA, 1-like.
   
 0.990
ENSNMLP00000027278
General transcription factor IIB.
  
 0.986
ENSNMLP00000017292
General transcription factor IIA, 2.
   
 0.985
ENSNMLP00000041448
General transcription factor IIA, 1-like.
   
 0.982
ENSNMLP00000005217
TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor.
   
 0.979
ENSNMLP00000021513
TAF5-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor.
   
 0.972
ENSNMLP00000012095
TAF7 RNA polymerase II, TATA box binding protein (TBP)-associated factor.
    
 0.971
ENSNMLP00000019856
TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor.
    
 0.971
ENSNMLP00000033281
TAF10 RNA polymerase II, TATA box binding protein (TBP)-associated factor.
    
 0.971
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
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