STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNMLP00000032605Tetratricopeptide repeat domain 4. (386 aa)    
Predicted Functional Partners:
ENSNMLP00000044572
annotation not available
   
 
 0.986
ENSNMLP00000024830
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
 0.948
ENSNMLP00000004608
BCL2 associated athanogene 3.
   
 0.851
ENSNMLP00000002523
annotation not available
  
 0.839
ENSNMLP00000018892
Heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 1.
  
 0.839
ENSNMLP00000022075
Heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 2.
  
 0.839
ENSNMLP00000044395
Heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 2.
  
 0.839
ENSNMLP00000012382
annotation not available
   
 0.807
ENSNMLP00000001863
Glyoxylate reductase 1 homolog (Arabidopsis).
    
 0.796
ENSNMLP00000011166
Natural killer cell triggering receptor.
  
 
 0.784
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
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