STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNMLP00000032715Alpha tubulin acetyltransferase 1. (246 aa)    
Predicted Functional Partners:
ENSNMLP00000016752
Tubulin tyrosine ligase-like family, member 5.
   
  
 0.519
ENSNMLP00000019120
Histone deacetylase 6.
   
  
 0.514
ENSNMLP00000041041
Sirtuin 2 (silent mating type information regulation 2, homolog) 2 (S. cerevisiae).
      
 0.514
ENSNMLP00000043687
annotation not available
      
 0.509
ENSNMLP00000025727
Nanos homolog 3.
      
 0.493
ENSNMLP00000018307
Methyltransferase like 13.
      
 0.432
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
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