STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNMLP00000032938CLN6 transmembrane ER protein a. (300 aa)    
Predicted Functional Partners:
ENSNMLP00000043338
annotation not available
    
 0.884
ENSNMLP00000004316
Fras1 related extracellular matrix 1b.
   
 
  0.810
ENSNMLP00000009878
Integrin, beta 6.
   
 0.743
ENSNMLP00000005458
Integrin, beta 8.
    
 0.733
ENSNMLP00000044893
Filamin C, gamma a (actin binding protein 280).
   
 0.701
ENSNMLP00000008925
Tenascin N.
   
 0.694
ENSNMLP00000028606
annotation not available
    
 0.694
ENSNMLP00000004042
annotation not available
    
 0.692
ENSNMLP00000008517
Tenascin C.
    
 0.692
ENSNMLP00000020083
Tenascin R (restrictin, janusin).
    
 0.692
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.