STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNMLP00000032980SUMO peptidase family member, NEDD8 specific. (212 aa)    
Predicted Functional Partners:
ENSNMLP00000037184
Iron-responsive element binding protein 2.
  
 
 0.994
ENSNMLP00000033246
annotation not available
    
 0.982
ENSNMLP00000033644
NEDD8 ubiquitin like modifier, like.
    
 0.982
ENSNMLP00000001620
Phosphatidylinositol glycan anchor biosynthesis, class L.
    
 0.920
ENSNMLP00000005873
annotation not available
    
 0.917
ENSNMLP00000044234
Aminocarboxymuconate semialdehyde decarboxylase.
    
 0.917
ENSNMLP00000026437
Squalene epoxidase a.
    
 0.867
ENSNMLP00000027527
Kynurenine 3-monooxygenase.
    
 0.867
ENSNMLP00000020441
Citrate synthase.
  
  
 0.861
UBA3
Ubiquitin like modifier activating enzyme 3.
     
 0.847
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.