STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNMLP00000033104Serine and arginine rich splicing factor 6a. (354 aa)    
Predicted Functional Partners:
ENSNMLP00000031843
Zgc:153681.
   
 0.964
ENSNMLP00000027624
SRSF protein kinase 1a.
    
 0.949
ENSNMLP00000041874
SRSF protein kinase 1b.
    
 0.949
ENSNMLP00000037698
Nuclear cap binding protein subunit 2.
    
 0.929
ENSNMLP00000040917
Transformer 2 beta homolog.
   
0.929
ENSNMLP00000001085
annotation not available
   
 0.918
ENSNMLP00000005930
U2 small nuclear RNA auxiliary factor 2a.
   
 0.916
ENSNMLP00000043978
Serine and arginine rich splicing factor 3a.
   
0.909
ENSNMLP00000029562
annotation not available
    
 0.889
ENSNMLP00000006849
Cleavage stimulation factor, 3' pre-RNA, subunit 3.
  
 0.886
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.