STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNMLP00000033131Nucleoporin 98. (1684 aa)    
Predicted Functional Partners:
ENSNMLP00000024835
Nucleoporin 107.
   
 0.999
ENSNMLP00000027592
Ribonucleic acid export 1.
   
 0.999
ENSNMLP00000030116
Nucleoporin 85.
   
 0.999
ENSNMLP00000035805
SEC13 homolog, nuclear pore and COPII coat complex component.
    
 0.999
ENSNMLP00000011321
Nucleoporin 93.
   
 0.998
ENSNMLP00000027529
SEH1-like (S. cerevisiae).
   
 0.998
ENSNMLP00000016115
Nucleoporin 160.
   
 0.997
ENSNMLP00000023615
Nucleoporin 43.
    
 0.997
NUP54
Nucleoporin 54.
   
0.996
ENSNMLP00000002437
annotation not available
   
 0.996
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.