STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNMLP00000033152Sec1 family domain containing 2. (678 aa)    
Predicted Functional Partners:
ENSNMLP00000018021
RAD50 interactor 1.
   
 
 0.882
ENSNMLP00000007240
Syntaxin 18.
    
 
 0.881
ENSNMLP00000029483
NBAS subunit of NRZ tethering complex.
    
 
 0.859
ENSNMLP00000001805
Zw10 kinetochore protein.
    
 
 0.838
ENSNMLP00000008893
annotation not available
    
 
 0.838
ENSNMLP00000024373
Sec1 family domain containing 1.
    
 
 0.816
VPS33B
VPS33B late endosome and lysosome associated.
   
 
  0.813
ENSNMLP00000043922
VPS33A core subunit of CORVET and HOPS complexes.
   
 
  0.803
ENSNMLP00000028601
Unconventional SNARE in the ER 1 homolog (S. cerevisiae).
   
   0.794
ENSNMLP00000007171
BCL2 interacting protein 1b.
    
 
 0.738
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.