STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNMLP00000033380Translocation associated membrane protein 2. (398 aa)    
Predicted Functional Partners:
ENSNMLP00000029594
SEC63 homolog, protein translocation regulator.
   
 
 0.772
ENSNMLP00000017251
Histocompatibility (minor) 13.
   
   0.516
ENSNMLP00000016195
Signal sequence receptor, gamma.
   
 
 0.511
ENSNMLP00000038953
Signal sequence receptor, beta.
   
 
 0.500
SEC61A1
SEC61 translocon alpha 1 subunit.
   
 
 0.485
ENSNMLP00000004457
SEC61 translocon beta subunit.
   
 0.448
ENSNMLP00000006586
Magnesium transporter 1.
   
    0.422
ENSNMLP00000031899
Tumor suppressor candidate 3.
   
    0.422
ENSNMLP00000002029
Signal sequence receptor, delta.
   
 
 0.400
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.