STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNMLP00000033981Retinoic acid induced 14. (659 aa)    
Predicted Functional Partners:
ENSNMLP00000024830
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
 0.798
ENSNMLP00000043214
Intraflagellar transport 81 homolog.
    
 0.640
ENSNMLP00000032458
Ribosomal protein S3.
    
 0.611
ENSNMLP00000029725
F-box and WD repeat domain containing 11a.
    
 0.576
ENSNMLP00000013916
S-phase kinase-associated protein 1.
    
  0.569
ENSNMLP00000008623
Inhibitor of nuclear factor kappa B kinase subunit beta.
    
 0.548
CHUK
Component of inhibitor of nuclear factor kappa B kinase complex.
    
 0.548
ENSNMLP00000022162
annotation not available
    
 0.547
ENSNMLP00000038996
annotation not available
    
 0.547
ENSNMLP00000038998
Myosin IIIB.
    
 0.547
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
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