STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNMLP00000034261Trafficking protein particle complex 13. (413 aa)    
Predicted Functional Partners:
ENSNMLP00000043574
Trafficking protein particle complex 12.
    
 0.994
ENSNMLP00000015975
Trafficking protein particle complex 1.
    
 0.992
ENSNMLP00000040362
Trafficking protein particle complex 2-like.
    
 0.989
ENSNMLP00000028703
Trafficking protein particle complex 2.
   
 0.987
ENSNMLP00000001738
Trafficking protein particle complex 6b-like.
   
 0.986
ENSNMLP00000015733
Trafficking protein particle complex 8.
   
 0.977
ENSNMLP00000022172
Trafficking protein particle complex 3.
    
 0.972
ENSNMLP00000004290
Trafficking protein particle complex 9.
     
 0.969
ENSNMLP00000007411
annotation not available
    
 0.957
TRAPPC5
Trafficking protein particle complex 5.
    
 0.957
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.