STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNMLP00000034422Checkpoint with forkhead and ring finger domains, E3 ubiquitin protein ligase. (611 aa)    
Predicted Functional Partners:
ENSNMLP00000024542
Ubiquitin-conjugating enzyme E2G 2 (UBC7 homolog, yeast).
    
 0.941
ENSNMLP00000029751
annotation not available
    
 0.937
ENSNMLP00000007213
Derlin 1.
    
 0.892
ENSNMLP00000041629
Derlin 2.
    
 0.892
ENSNMLP00000015525
Cytochrome c oxidase assembly factor 7.
    
 0.879
ENSNMLP00000037178
OS9 endoplasmic reticulum lectin.
   
 0.879
ENSNMLP00000040841
Endoplasmic reticulum lectin 1.
   
 0.879
ENSNMLP00000015273
Ubiquitin recognition factor in ER associated degradation 1.
   
 0.870
ENSNMLP00000003144
Fas (TNFRSF6) associated factor 1.
    
 0.865
ENSNMLP00000006047
Katanin p60 subunit A-like 2.
    
 0.865
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
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