STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNMLP00000034521RNA binding motif protein 17. (404 aa)    
Predicted Functional Partners:
ENSNMLP00000019648
DEAQ box RNA-dependent ATPase 1.
   
 0.995
ENSNMLP00000010703
Small nuclear ribonucleoprotein polypeptide A.
   
 0.989
ENSNMLP00000020260
Splicing factor 3b, subunit 1.
   
 0.973
ENSNMLP00000025927
annotation not available
   
 
 0.964
ENSNMLP00000025913
Splicing factor 3a, subunit 2.
    
 0.959
ENSNMLP00000015215
Small nuclear ribonucleoprotein polypeptide B2.
   
 0.952
ENSNMLP00000013887
DEAD (Asp-Glu-Ala-Asp) box polypeptide 46.
   
 0.951
ENSNMLP00000022830
Survival motor neuron domain containing 1.
   
 
  0.949
ENSNMLP00000021060
Splicing factor 3a, subunit 3.
   
 0.948
ENSNMLP00000007267
PHD finger protein 5A.
   
 
 0.945
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.