STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNMLP00000034605Transcription factor 12. (695 aa)    
Predicted Functional Partners:
ENSNMLP00000041888
Catenin (cadherin-associated protein), beta 1.
    
 0.965
ENSNMLP00000028469
T-cell acute lymphocytic leukemia 1.
    
 0.927
ENSNMLP00000008892
annotation not available
    
 0.903
ENSNMLP00000023688
Junction plakoglobin a.
    
 0.903
ENSNMLP00000018660
annotation not available
    
 0.897
ENSNMLP00000035959
LIM domain only 2 (rhombotin-like 1).
    
 0.891
ENSNMLP00000003830
Myogenin.
   
 0.884
ENSNMLP00000004693
Myogenic factor 5.
    
 0.880
ENSNMLP00000006817
Myogenic differentiation 1.
    
 0.880
ENSNMLP00000017180
LIM-domain binding 1b.
    
 0.869
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
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